MICE Toolkit is moving to a new location soon. The current version ( will be the last version available on this webpage, a link to the new webpage will be posted here.


Medical Interactive Creative Environment



MICE is a flexible application for image data analysis developed within the project.

Support for this product is very limited at this early alpha stage.

MICE User Manual 1.0


Current Features

  • Design your own calculation process in a node-based graphical interface.
  • Import series from MIQA, files and folders. (DCM, NRRD, JPG, BMP etc.)
  • Batch calculations with MIQA.
  • Supported import DICOM modalities: CT, MR, PT, REG, RTSTRUCT, RTDOSE.
  • Registration support via Elastix or predefined DICOM REG-structures.
  • Texture analysis with Gray-Level Co-Occurrence Matrix and Local Binary Pattern.
  • PET SUV-value calculations.
  • DCE: Contrast Agent Quantification, Area Under Curve, KETY (KTrans, ve), T1 quantification from IR and variable flip angle series, T2 quantification.
  • Radiotherapy: DVH Tools, Gamma Analysis.
  • ITK Filters.
  • VTK Visualization.
  • Basic arithmetic of 3D-volumes.
  • Mask generation for faster calculations.
  • Generate masks from RTSTRUCT data.
  • Basic statistics.
  • Exports data to DICOM, MHD, JPEG, Excel.


Calculating K-Trans Map

Calculating K-Trans Map

Induced Susceptibility Effect

Induced Susceptibility Effect (image dataset courtesy of the OsiriX website)

Annotated example (more to come)

Annotated example (more to come..)


Visualization (image dataset courtesy of the OsiriX website)

Test of DVH and gamma index analysis with export to excel.

Test of DVH and gamma index analysis with export to excel.

Visualizer cutom rendering settings ()

Visualizer custom rendering settings (image dataset courtesy of the OsiriX website)



  • .NET Framework 4.6.2
  • Microsoft Windows 7, 8, 8.1, 10 64-bit


  • Quad Core CPU at 3.5 GHz or faster
  • 32GB RAM
  • Good graphics card


  1. Run MICE-Toolkit-n.n.n.n-Setup.exe
  2. Activate MICE with the license key that was generated for your download.